Programming Software

Phylogenetic Inference and Divergence-time Estimation

Species Delimitation

MCMC Diagnosis

Comparative Methods

R packages

Make sure you have up-to-date versions of the following packages.

  • ape
  • phytools
  • geiger 
  • OUCH
  • OUwie
  • surface
  • pmc
  • picante
  • adephylo
  • diversitree
  • BioGeoBEARS
  • laser
  • TreeSim
  • TreePar
  • devtools
  • nlme
  • reshape
  • qpcR
  • calibrate
  • General Purpose

    Leave a Reply

    Your email address will not be published. Required fields are marked *

    You may use these HTML tags and attributes: <a href="" title=""> <abbr title=""> <acronym title=""> <b> <blockquote cite=""> <cite> <code> <del datetime=""> <em> <i> <q cite=""> <strike> <strong>